Publications (bofore 2003)

• M. Takano, H.K. Nakamura, K. Nagayama, and A. Suyama, "Investigating a link between all-atom model simulation and the Ising-based theory on the helix-coil transition. II. Non-stationary properties", Journal of Chemical Physics, 118, 10312-10322 (2003)
• M. Takano, J. Higo, H. K. Nakamura, and M. Sasai, "Molecular dynamics simulation using coarse-grained model to study protein function and beyond", Proc. IEEE Congress on Evolutionary Computation (Sarker et al. eds., IEEE press), 4, 2719-2726 (2003)
• J. A. Rose, M. Takano, M. Hagiya, and A. Suyama, "A DNA computing-based genetic program for in vitro protein evolution via constrained pseudo-module shuffling", Genetic Programming and Evolvable Machines, 4, 139-152 (2003)
• J. A. Rose, M. Takano, and A. Suyama, "A PNA-mediated whiplash PCR-based program for in vitro protein evolution", Lecture Note in Computer Sciences, 2568 (DNA Computing), 47-60 (2003)
• M. Takano, K. Nagayama, and A. Suyama, "How the all-atom simulation and the Ising-based theory reconcile with each other on the helix-coil transition", Journal of Biological Physics, 28, 155-161 (2002)
• M. Takano, K. Nagayama, and A. Suyama, "Investigating a link between all-atom model simulation and the Ising-based theory on the helix-coil transition: equilibrium statistical mechanics", Journal of Chemical Physics, 116, 2219-2228 (2002)
• M. Takano, T. Yamato, J. Higo, A. Suyama, and K. Nagayama, "Molecular dynamics of a 15-residue poly(L-alanine) in water: Helix formation and energetics", Journal of the American Chemical Society, 121, 605-612 (1999)
• M. Takano, T. Takahashi, and K. Nagayama, "Helix-Coil Transition and 1/f fluctuation in a polypeptide chain", Physical Review Letters, 80, 5691-5694 (1998)